2025-05-02: Gomez-Tourino et al. (Study ID = DOI:10.21417/B7C88S): Changed library_generation_method from incorrect "RT (oligo-dT)+Adaptive" to "RT(specific)+PCR"
2024-03-12: Updated gene calls for Adaptive's incorrectly named genes (according to AIRR suggested nomenclature)
Updated Mitchell et al. and Seay et al. with corrected VDJ gene nomenclature calls
Summary of changes at the gene level (appropriate allele changes also made - e.g. TRBV1-1*01 to TRBV1*01):
TRBV1-1 to TRBV1 - 124871 sequences
TRBV2-1 to TRBV2 - 2309941 sequences
TRBV9-1 to TRBV9 - 2577037 sequences
TRBV13-1 to TRBV13 - 550833 sequences
TRBV14-1 to TRBV14 - 829030 sequences
TRBV15-1 to TRBV15 - 901472 sequences
TRBV16-1 to TRBV16 - 60085 sequences
TRBV17-1 to TRBV17 - 1965 sequences
TRBV18-1 to TRBV18 - 1712890 sequences
TRBV19-1 to TRBV19 - 3569313 sequences
TRBV26-1 to TRBV26 - 436 sequences
TRBV27-1 to TRBV27 - 3042168 sequences
TRBV28-1 to TRBV28 - 3132593 sequences
TRBV30-1 to TRBV30 - 1635960 sequences
TRBD1-1 to TRBD1 - 42629748 sequences
TRBD2-1 to TRBD2 - 42797994 sequences
2024-02-07: Study added
32 Million annotated sequences from Gomez-Tourino et al., "T cell receptor β-chains display abnormal shortening and repertoire sharing in type 1 diabetes"
2023-12-07: Study added
6 Thousand annotated sequences from Anderson et al., "Human islet T cells are highly reactive to preproinsulin in type 1 diabetes"
2023-04-04: Study added
6.9 Million annotated sequences from Seay et al., "Tissue distribution and clonal diversity of the T and B cell repertoire in type 1 diabetes"
2023-01-19: Study added
62 Million annotated sequences from Mitchell et al., "Temporal development of T cell receptor repertoires during childhood in health and disease", including subject MHC/HLA typing.
