Fifth COVID-19 AIRR-seq study available on iReceptor Gateway

In collaboration with the AIRR Community, we are pleased to announce the fifth COVID-19 AIRR-seq study available for searching and download in the AIRR Data Commons and through the iReceptor Gateway. 13.5 M annotated sequences from Schultheiß et al. "Next Generation Sequencing of T and B cell receptor repertoires from COVID-19 patients showed signatures associated with severity of disease" have been loaded into the AIRR COVID-19 repository and are now available through the iReceptor Gateway.

Fourth COVID-19 AIRR-seq study available on iReceptor Gateway

In collaboration with the AIRR Community, we are pleased to announce the fourth COVID-19 AIRR-seq study available for searching and download in the AIRR Data Commons and through the iReceptor Gateway. 66.9 M annotated sequences from Nature Medicine by Liao et al. "Single-cell Landscape of Bronchoalveolar Immune Cells in Patients With COVID-19" have been loaded into the AIRR COVID-19 repository and are now available through the iReceptor Gateway.

Third COVID-19 AIRR-seq study available on iReceptor Gateway

In collaboration with the AIRR Community, we are pleased to announce the third COVID-19 AIRR-seq study available for searching and download in the AIRR Data Commons and through the iReceptor Gateway. 3.7 M annotated sequences from the Galson et al. pre-print "Deep sequencing of B cell receptor repertoires from COVID-19 patients reveals strong convergent immune signatures" have been loaded into the AIRR COVID-19 repository.

Second COVID-19 AIRR-seq study available on iReceptor Gateway

In collaboration with the AIRR Community, we are pleased to announce the second COVID-19 AIRR-seq study available for searching and download through the iReceptor Gateway. 87 Million annotated sequences from the pre-press paper Longitudinal high-throughput TCR repertoire profiling reveals the dynamics of T cell memory formation after mild COVID-19 infection from Minervina, et al. have been loaded into the AIRR COVID-19 repository.

COVID-19 Data Sharing Guidelines released from Research Data Alliance

The Research Data Alliance (RDA) is a community-driven initiative that provides a neutral space for more than 10k members from 145 countries to come together through focused global Working and Interest Groups to develop and adopt infrastructure that promotes data-sahring and data-driven research. The RDA's mission is to build the social and technical bridges to enable the open sharing and re-use of data.

First COVID-19 AIRR-seq study available through iReceptor Gateway

In collaboration with the AIRR Community, we are pleased to announce the first COVID-19 AIRR-seq study available for searching and download through the iReceptor Gateway. 8.9 Million annotated sequences from the paper B cell clonal expansion and convergent antibody responses to SARS-CoV-2 from Nielsen, et al. has been loaded into the AIRR COVID-19 repository. We expect a number of other papers to be added to this repository in the near future.

COVID-19 Ultra Hackathon this weekend!

Members of the iReceptor team are hacking throughout the weekend on a project called “Adaptive ImmunoSeq Repository as part of the ./hackseq-rna virtual COVID-19 Ultra Hackathon. Microsoft and Adaptive Biotechnologies are exploring how the immune system responds to COVID-19 and the 3 day goal is to develop a tool to query the Adaptive ImmunoSeq repository (using their WebAPIs), download data, and convert it to the standard AIRR-seq data formats for Repertoires and Rearrangements.

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