The iReceptor team was recently awarded CANARIE Research Data Management funding to extend the iReceptor Gateway. The project, "Towards Systems Immunology: Integrating FAIR data into the iReceptor Platform" will help the iReceptor platform integrate a number of important immunology related data beyond the standard AIRR-seq data, such as single cell sequencing and germline integration. Thank you to CANARIE for their continued support!
In collaboration with the AIRR Community, we are pleased to announce the tenth COVID-19 AIRR-seq study available for searching and download in the AIRR Data Commons and through the iReceptor Gateway. 542 M annotated sequences from Nolan et.
In collaboration with the AIRR Community, we are pleased to announce the ninth COVID-19 AIRR-seq study available for searching and download in the AIRR Data Commons and through the iReceptor Gateway. 12 M annotated sequences from Kuri-Cervantes et. al Comprehensive mapping of immune perturbations associated with severe COVID-19 have been loaded into the AIRR COVID-19 repository and are now available through the iReceptor Gateway.
From 18:00 August 24 to 08:00 August 25 one of the IPA servers was down. During this time 452 Million sequence annotations from Zvyagin et al "Tracking T-cell immune reconstitution after TCRαβ/CD19-depleted hematopoietic cells transplantation in children" were unavailable. All services are now back on line.
Network outage Aug 25 07:00 - 07:30 PST
iReceptor's infrastructure provider, Compute Canada, has a scheduled network outage on Tuesday August 25 between 7:00-7:30 PDT/10:00-10:30 EDT. The outage is expected to be less than 2 minutes, but could be up to 20 minutes. All iReceptor services may be impacted by this outage.
The iReceptor Team has an opening for an Immune Repertoire Data Curator. The ideal candidate combines an understanding of immunology with experience and training in bioinformatics. Read here if you are interested in learning more about this opportunity.
In collaboration with the AIRR Community, we are pleased to announce the eighth COVID-19 AIRR-seq studies available for searching and download in the AIRR Data Commons and through the iReceptor Gateway. 3.4 M annotated sequences from Kim et. al Stereotypic Neutralizing VH Clonotypes Against SARS-CoV-2 RBD in COVID-19 Patients and the Healthy Population have been loaded into the AIRR COVID-19 repository and are now available through the iReceptor Gateway.
In collaboration with the AIRR Community, we are pleased to announce the sixth and seventh COVID-19 AIRR-seq studies available for searching and download in the AIRR Data Commons and through the iReceptor Gateway.
In collaboration with the AIRR Community, we are pleased to announce the fifth COVID-19 AIRR-seq study available for searching and download in the AIRR Data Commons and through the iReceptor Gateway. 13.5 M annotated sequences from Schultheiß et al. "Next Generation Sequencing of T and B cell receptor repertoires from COVID-19 patients showed signatures associated with severity of disease" have been loaded into the AIRR COVID-19 repository and are now available through the iReceptor Gateway.
In collaboration with the AIRR Community, we are pleased to announce the fourth COVID-19 AIRR-seq study available for searching and download in the AIRR Data Commons and through the iReceptor Gateway. 66.9 M annotated sequences from Nature Medicine by Liao et al. "Single-cell Landscape of Bronchoalveolar Immune Cells in Patients With COVID-19" have been loaded into the AIRR COVID-19 repository and are now available through the iReceptor Gateway.
