In collaboration with the AIRR Community, we are pleased to announce the ninth COVID-19 AIRR-seq study available for searching and download in the AIRR Data Commons and through the iReceptor Gateway. 12 M annotated sequences from Kuri-Cervantes et. al Comprehensive mapping of immune perturbations associated with severe COVID-19 have been loaded into the AIRR COVID-19 repository and are now available through the iReceptor Gateway.
From 18:00 August 24 to 08:00 August 25 one of the IPA servers was down. During this time 452 Million sequence annotations from Zvyagin et al "Tracking T-cell immune reconstitution after TCRαβ/CD19-depleted hematopoietic cells transplantation in children" were unavailable. All services are now back on line.
Network outage Aug 25 07:00 - 07:30 PST
iReceptor's infrastructure provider, Compute Canada, has a scheduled network outage on Tuesday August 25 between 7:00-7:30 PDT/10:00-10:30 EDT. The outage is expected to be less than 2 minutes, but could be up to 20 minutes. All iReceptor services may be impacted by this outage.
Research Data Canada recently created a comprehensive blog post highlighting the iReceptor Gateway's rapid response to the COVID-19 pandemic. The Gateway facilitaties interoperable data sharing accelerates diagnostics and vaccine development.
The iReceptor Team has an opening for an Immune Repertoire Data Curator. The ideal candidate combines an understanding of immunology with experience and training in bioinformatics. Read here if you are interested in learning more about this opportunity.
In collaboration with the AIRR Community, we are pleased to announce the eighth COVID-19 AIRR-seq studies available for searching and download in the AIRR Data Commons and through the iReceptor Gateway. 3.4 M annotated sequences from Kim et. al Stereotypic Neutralizing VH Clonotypes Against SARS-CoV-2 RBD in COVID-19 Patients and the Healthy Population have been loaded into the AIRR COVID-19 repository and are now available through the iReceptor Gateway.
In collaboration with the AIRR Community, we are pleased to announce the sixth and seventh COVID-19 AIRR-seq studies available for searching and download in the AIRR Data Commons and through the iReceptor Gateway.
In collaboration with the AIRR Community, we are pleased to announce the fifth COVID-19 AIRR-seq study available for searching and download in the AIRR Data Commons and through the iReceptor Gateway. 13.5 M annotated sequences from Schultheiß et al. "Next Generation Sequencing of T and B cell receptor repertoires from COVID-19 patients showed signatures associated with severity of disease" have been loaded into the AIRR COVID-19 repository and are now available through the iReceptor Gateway.
In collaboration with the AIRR Community, we are pleased to announce the fourth COVID-19 AIRR-seq study available for searching and download in the AIRR Data Commons and through the iReceptor Gateway. 66.9 M annotated sequences from Nature Medicine by Liao et al. "Single-cell Landscape of Bronchoalveolar Immune Cells in Patients With COVID-19" have been loaded into the AIRR COVID-19 repository and are now available through the iReceptor Gateway.
In collaboration with the AIRR Community, we are pleased to announce the third COVID-19 AIRR-seq study available for searching and download in the AIRR Data Commons and through the iReceptor Gateway. 3.7 M annotated sequences from the Galson et al. pre-print "Deep sequencing of B cell receptor repertoires from COVID-19 patients reveals strong convergent immune signatures" have been loaded into the AIRR COVID-19 repository.
